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          Mouse-Derived Gut Microbiota Library

          GemPharmatech has established an open mouse gut microbiota library, mGBC, by isolating and culturing bacteria from fecal and intestinal contents of mice (Mus musculus) obtained from different laboratories and the wild. A total of 150 isolates belonging to 142 different species spanning 71 genera, 28 families, and 5 phyla were included in the mGBC, including 9 newly identified species, based on detailed morphological and 16S sequencing analysis and LPSN.

          Verrucomicrobia


          Species

          Family 

          GPT Strain ID

          NMDC Accession Number

          NMDC Nucleotide Sequences 

          Akkermansia muciniphila

          Verrucomicrobiae

          GPTB0005

          NMDC20057722

          NMDCN0001CH1


          Bacteroidetes


          Species

          Family 

          GPT Strain ID

          NMDC Accession Number

          NMDC Nucleotide Sequences 

          Bacteroides acidifaciens

          Bacteroidaceae

          GPTB0083

          NMDC20057802

          NMDCN0001CJH

          Bacteroides caccae

          Bacteroidaceae

          GPTB0010

          NMDC20057727

          NMDCN0001CH6

          Bacteroides caecimuris

          Bacteroidaceae

          GPTB0082

          NMDC20057801

          NMDCN0001CJG

          Bacteroides dorei

          Bacteroidaceae

          GPTB0073

          NMDC20057791

          NMDCN0001CJ6

          Bacteroides faecichinchillae

          Bacteroidaceae

          GPTB0004

          NMDC20057721

          NMDCN0001CH0

          Bacteroides ovatus

          Bacteroidaceae

          GPTB0009

          NMDC20057726

          NMDCN0001CH5

          Bacteroides stercorirosoris

          Bacteroidaceae

          GPTB0008

          NMDC20057725

          NMDCN0001CH4

          Bacteroides thetaiotaomicron

          Bacteroidaceae

          GPTB0036

          NMDC20057753

          NMDCN0001CI0

          Bacteroides uniformis

          Bacteroidaceae

          GPTB0044

          NMDC20057761

          NMDCN0001CI8

          Bacteroides xylanisolvens

          Bacteroidaceae

          GPTB0055

          NMDC20057772

          NMDCN0001CIJ

          Bacteroides nordii

          Bacteroidaceae

          GPTB0053

          NMDC20057770

          NMDCN0001CIH

          Phocaeicola sartorii

          Bacteroidaceae

          GPTB0043

          NMDC20057760

          NMDCN0001CI7

          Phocaeicola vulgatus

          Bacteroidaceae

          GPTB0049

          NMDC20057766

          NMDCN0001CID

          Parabacteroides distasonis

          Tannerellaceae

          GPTB0035

          NMDC20057752

          NMDCN0001CHV

          Parabacteroides goldsteinii

          Tannerellaceae

          GPTB0019

          NMDC20057736

          NMDCN0001CHF

          Parabacteroides johnsonii

          Tannerellaceae

          GPTB0075

          NMDC20057793

          NMDCN0001CJ8

          Parabacteroides merdae

          Tannerellaceae

          GPTB0086

          NMDC20057805

          NMDCN0001CJK

          Heminiphilus faecis

          Muribaculaceae

          GPTB0137

          NMDC20057858

          NMDCN0001CL9

          Muribaculum intestinale

          Muribaculaceae

          GPTB0014

          NMDC20057731

          NMDCN0001CHA

          Butyricimonas virosa

          Odoribacteraceae

          GPTB0028

          NMDC20057745

          NMDCN0001CHO


          Actinobacteria


          Species

          Family

          GPT Strain ID

          NMDC Accession Number

          NMDC Nucleotide Sequences 

          Bifidobacterium pseudolongum

          Bifidobacteriaceae

          GPTB0058

          NMDC20057775

          NMDCN0001CIM

          Bifidobacterium pseudolongum

          Bifidobacteriaceae

          GPTB0066

          NMDC20057783

          NMDCN0001CIU

          Brevibacterium linens

          Brevibacteriaceae

          GPTB0040

          NMDC20057757

          NMDCN0001CI4

          Brachybacterium paraconglomeratum

          Dermabacteraceae

          GPTB0041

          NMDC20057758

          NMDCN0001CI5

          Corynebacterium casei

          Corynebacteriaceae

          GPTB0039

          NMDC20057756

          NMDCN0001CI3

          Corynebacterium glyciniphilum

          Corynebacteriaceae

          GPTB0052

          NMDC20057769

          NMDCN0001CIG

          Caniella muris

          Atopobiaceae

          GPTB0071

          NMDC20057789

          NMDCN0001CJ4

          Leptogranulimonas caecicola

          Atopobiaceae

          GPTB0135

          NMDC20057856

          NMDCN0001CL7

          Adlercreutzia caecimuris

          Eggerthellaceae

          GPTB0070

          NMDC20057788

          NMDCN0001CJ3

          Adlercreutzia muris

          Eggerthellaceae

          GPTB0087

          NMDC20057806

          NMDCN0001CJL

          Stereobacter intestinalis

          Eggerthellaceae

          GPTB0065

          NMDC20057782

          NMDCN0001CIT


          Firmicutes

          Species

          Family

          GPT Strain ID

          NMDC Accession Number

          NMDC Nucleotide Sequences 

          Staphylococcus arlettae

          Staphylococcaceae

          GPTB0027

          NMDC20057744

          NMDCN0001CHN

          Staphylococcus capitis

          Staphylococcaceae

          GPTB0084

          NMDC20057803

          NMDCN0001CJI

          Staphylococcus cohnii

          Staphylococcaceae

          GPTB0026

          NMDC20057743

          NMDCN0001CHM

          Staphylococcus epidermidis

          Staphylococcaceae

          GPTB0076

          NMDC20057794

          NMDCN0001CJ9

          Staphylococcus equorum

          Staphylococcaceae

          GPTB0034

          NMDC20057751

          NMDCN0001CHU

          Staphylococcus hominis

          Staphylococcaceae

          GPTB0042

          NMDC20057759

          NMDCN0001CI6

          Staphylococcus nepalensis

          Staphylococcaceae

          GPTB0025

          NMDC20057742

          NMDCN0001CHL

          Staphylococcus saprophyticus

          Staphylococcaceae

          GPTB0023

          NMDC20057740

          NMDCN0001CHJ

          Staphylococcus sciuri

          Staphylococcaceae

          GPTB0015

          NMDC20057732

          NMDCN0001CHB

          Staphylococcus xylosus

          Staphylococcaceae

          GPTB0013

          NMDC20057730

          NMDCN0001CH9

          Jeotgalicoccus nanhaiensis

          Staphylococcaceae

          GPTB0046

          NMDC20057763

          NMDCN0001CIA

          Mammaliicoccus lentus

          Staphylococcaceae

          GPTB0022

          NMDC20057739

          NMDCN0001CHI

          Bacillus cereus

          Bacillaceae

          GPTB0110

          NMDC20057830

          NMDCN0001CKD

          Bacillus licheniformis

          Bacillaceae

          GPTB0098

          NMDC20057818

          NMDCN0001CK1

          Enterococcus avium

          Enterococcaceae

          GPTB0085

          NMDC20057804

          NMDCN0001CJJ

          Enterococcus casseliflavus

          Enterococcaceae

          GPTB0017

          NMDC20057734

          NMDCN0001CHD

          Enterococcus faecalis

          Enterococcaceae

          GPTB0007

          NMDC20057724

          NMDCN0001CH3

          Enterococcus faecium

          Enterococcaceae

          GPTB0105

          NMDC20057825

          NMDCN0001CK8

          Enterococcus gallinarum

          Enterococcaceae

          GPTB0011

          NMDC20057728

          NMDCN0001CH7

          Enterococcus hirae

          Enterococcaceae

          GPTB0002

          NMDC20057719

          NMDCN0001CGU

          Enterococcus ratti

          Enterococcaceae

          GPTB0078

          NMDC20057796

          NMDCN0001CJB

          Aerococcus viridans

          Aerococcaceae

          GPTB0136

          NMDC20057857

          NMDCN0001CL8

          Atopostipes suicloacalis

          Carnobacteriaceae

          GPTB0127

          NMDC20057848

          NMDCN0001CKV

          Lactobacillus animalis

          Lactobacillaceae

          GPTB0024

          NMDC20057741

          NMDCN0001CHK

          lactobacillus caviae

          Lactobacillaceae

          GPTB0097

          NMDC20057817

          NMDCN0001CK0

          Lactobacillus faecis

          Lactobacillaceae

          GPTB0016

          NMDC20057733

          NMDCN0001CHC

          Lactobacillus intestinalis

          Lactobacillaceae

          GPTB0047

          NMDC20057764

          NMDCN0001CIB

          Lactobacillus johnsonii

          Lactobacillaceae

          GPTB0006

          NMDC20057723

          NMDCN0001CH2

          Lactobacillus vaginalis

          Lactobacillaceae

          GPTB0068

          NMDC20057785

          NMDCN0001CJ0

          Ligilactobacillus murinus

          Lactobacillaceae

          GPTB0001

          NMDC20057718

          NMDCN0001CGT

          Limosilactobacillus reuteri

          Lactobacillaceae

          GPTB0018

          NMDC20057735

          NMDCN0001CHE

          Streptococcus alactolyticus

          Streptococcaceae

          GPTB0057

          NMDC20057774

          NMDCN0001CIL

          Streptococcus danieliae

          Streptococcaceae

          GPTB0045

          NMDC20057762

          NMDCN0001CI9

          Streptococcus ferus

          Streptococcaceae

          GPTB0020

          NMDC20057737

          NMDCN0001CHG

          Streptococcus hyointestinalis

          Streptococcaceae

          GPTB0067

          NMDC20057784

          NMDCN0001CIV

          Streptococcus merionis

          Streptococcaceae

          GPTB0080

          NMDC20057799

          NMDCN0001CJE

          Lactococcus formosensis

          Streptococcaceae

          GPTB0069

          NMDC20057786

          NMDCN0001CJ1

          Lactococcus formosensis

          Streptococcaceae

          GPTB0069-1

          NMDC20057787

          NMDCN0001CJ2

          Lactococcus garvieae

          Streptococcaceae

          GPTB0061

          NMDC20057778

          NMDCN0001CIP

          Lactococcus lactis

          Streptococcaceae

          GPTB0059

          NMDC20057776

          NMDCN0001CIN

          Lactococcus taiwanensis

          Streptococcaceae

          GPTB0060

          NMDC20057777

          NMDCN0001CIO

          Lactococcus taiwanensis

          Streptococcaceae

          GPTB0048

          NMDC20057765

          NMDCN0001CIC

          Allobaculum mucolyticum

          Erysipelotrichaceae

          GPTB0111

          NMDC20057831

          NMDCN0001CKE

          Amedibacillus dolichus

          Erysipelotrichaceae

          GPTB0119

          NMDC20057840

          NMDCN0001CKN

          Dubosiella newyorkensis

          Erysipelotrichaceae

          GPTB0056

          NMDC20057773

          NMDCN0001CIK

          Faecalibaculum rodentium

          Erysipelotrichaceae

          GPTB0074

          NMDC20057792

          NMDCN0001CJ7

          Ileibacterium valens

          Erysipelotrichaceae

          GPTB0114

          NMDC20057835

          NMDCN0001CKI

          Longibaculum muris

          Erysipelotrichaceae

          GPTB0116

          NMDC20057837

          NMDCN0001CKK

          Thomasclavelia ramosa

          Erysipelotrichaceae

          GPTB0124

          NMDC20057845

          NMDCN0001CKS

          Thomasclavelia cocleata

          Erysipelotrichaceae

          GPTB0003

          NMDC20057720

          NMDCN0001CGV

          Clostridium innocuum

          Erysipelotrichaceae

          GPTB0033

          NMDC20057750

          NMDCN0001CHT

          Erysipelotrichaceae bacterium

          Erysipelotrichaceae

          GPTB0145

          NMDC20057866

          NMDCN0001CLH

          Anaerosalibacter bizertensis

          Tissierellaceae

          GPTB0126

          NMDC20057847

          NMDCN0001CKU

          Tissierella praeacuta

          Tissierellaceae

          GPTB0093

          NMDC20057813

          NMDCN0001CJS

          Faeciclostridum intestinale

          Clostridiaceae

          GPTB0115

          NMDC20057836

          NMDCN0001CKJ

          Clostridium botulinum

          Clostridiaceae

          GPTB0037

          NMDC20057754

          NMDCN0001CI1

          Clostridium perfringens

          Clostridiaceae

          GPTB0143

          NMDC20057864

          NMDCN0001CLF

          Clostridium sporogenes

          Clostridiaceae

          GPTB0054

          NMDC20057771

          NMDCN0001CII

          Clostridium porci

          Clostridiaceae

          GPTB0117

          NMDC20057838

          NMDCN0001CKL

          Clostridium faecis

          Clostridiaceae

          GPTB0125

          NMDC20057846

          NMDCN0001CKT

          Anaerotruncus colihominis

          Oscillospiraceae

          GPTB0092

          NMDC20057811

          NMDCN0001CJQ

          Anaerotruncus colihominis

          Oscillospiraceae

          GPTB0092-1

          NMDC20057812

          NMDCN0001CJR

          Bittarella massiliensis

          Oscillospiraceae

          GPTB0128

          NMDC20057849

          NMDCN0001CL0

          Flavonifractor plautii

          Oscillospiraceae

          GPTB0129

          NMDC20057850

          NMDCN0001CL1

          Flintibacter butyricus

          Oscillospiraceae

          GPTB0107

          NMDC20057827

          NMDCN0001CKA

          Flintibacter butyricus

          Oscillospiraceae

          GPTB0122

          NMDC20057843

          NMDCN0001CKQ

          Flintibacter muris

          Oscillospiraceae

          GPTB0103

          NMDC20057823

          NMDCN0001CK6

          Lipomuribacter intestinalis

          Oscillospiraceae

          GPTB0064

          NMDC20057781

          NMDCN0001CIS

          Phocea massiliensis

          Oscillospiraceae

          GPTB0113

          NMDC20057834

          NMDCN0001CKH

          Rigidibacter intestinalis

          Oscillospiraceae

          GPTB0134

          NMDC20057855

          NMDCN0001CL6

          Ruminococcus muris

          Oscillospiraceae

          GPTB0109

          NMDC20057829

          NMDCN0001CKC

          Intestinifractor faecis

          Oscillospiraceae

          GPTB0133

          NMDC20057854

          NMDCN0001CL5

          Acutalibacter intestinalis

          Oscillospiraceae

          GPTB0101

          NMDC20057821

          NMDCN0001CK4

          Oscillospiraceae bacterium

          Oscillospiraceae

          GPTB0094

          NMDC20057814

          NMDCN0001CJT

          Guopingia tenuis

          Christensenellaceae

          GPTB0106

          NMDC20057826

          NMDCN0001CK9

          Anaerofustis stercorihominis

          Eubacteriaceae

          GPTB0050

          NMDC20057767

          NMDCN0001CIE

          Anaerotruncus colihominis

          Eubacteriaceae

          GPTB0095

          NMDC20057815

          NMDCN0001CJU

          Anaerotruncus colihominis

          Eubacteriaceae

          GPTB0096

          NMDC20057816

          NMDCN0001CJV

          Emergencia timonensis

          Eubacteriaceae

          GPTB0123

          NMDC20057844

          NMDCN0001CKR

          Clostridioides difficile

          Peptostreptococcaceae

          GPTB0141

          NMDC20057862

          NMDCN0001CLD

          Paraclostridium bifermentans

          Peptostreptococcaceae

          GPTB0012

          NMDC20057729

          NMDCN0001CH8

          Anaerostipes caccae

          Lachnospiraceae

          GPTB0030

          NMDC20057747

          NMDCN0001CHQ

          Antifaeciroseburia intestinalis

          Lachnospiraceae

          GPTB0112

          NMDC20057832

          NMDCN0001CKF

          Antifaeciroseburia intestinalis

          Lachnospiraceae

          GPTB0112-1

          NMDC20057833

          NMDCN0001CKG

          Blautia coccoides

          Lachnospiraceae

          GPTB0130

          NMDC20057851

          NMDCN0001CL2

          Blautia hominis

          Lachnospiraceae

          GPTB0120

          NMDC20057841

          NMDCN0001CKO

          Blautia producta

          Lachnospiraceae

          GPTB0142

          NMDC20057863

          NMDCN0001CLE

          Blautia pseudococcoides

          Lachnospiraceae

          GPTB0051

          NMDC20057768

          NMDCN0001CIF

          Enterocloster aldenensis

          Lachnospiraceae

          GPTB0144

          NMDC20057865

          NMDCN0001CLG

          Faecalicatena contorta

          Lachnospiraceae

          GPTB0100

          NMDC20057820

          NMDCN0001CK3

          Faecalicatena orotica

          Lachnospiraceae

          GPTB0131

          NMDC20057852

          NMDCN0001CL3

          Faecibacter intestinalis

          Lachnospiraceae

          GPTB0132

          NMDC20057853

          NMDCN0001CL4

          Lacrimispora celerecrescens

          Lachnospiraceae

          GPTB0138

          NMDC20057859

          NMDCN0001CLA

          Murispiricella intestinalis

          Lachnospiraceae

          GPTB0090

          NMDC20057809

          NMDCN0001CJO

          Musculimicrobium intestinale

          Lachnospiraceae

          GPTB0139

          NMDC20057860

          NMDCN0001CLB

          Paramurimonas faecis

          Lachnospiraceae

          GPTB0146

          NMDC20057867

          NMDCN0001CLI

          Paramurimonas intestinalis

          Lachnospiraceae

          GPTB0102

          NMDC20057822

          NMDCN0001CK5

          Roseburia muris

          Lachnospiraceae

          GPTB0091

          NMDC20057810

          NMDCN0001CJP

          Schaedlerella arabinosiphila

          Lachnospiraceae

          GPTB0077

          NMDC20057795

          NMDCN0001CJA

          Lachnospiraceae bacterium

          Lachnospiraceae

          GPTB0079

          NMDC20057797

          NMDCN0001CJC

          Lachnospiraceae bacterium

          Lachnospiraceae

          GPTB0079-1

          NMDC20057798

          NMDCN0001CJD

          Lachnospiraceae bacterium

          Lachnospiraceae

          GPTB0099

          NMDC20057819

          NMDCN0001CK2

          Lachnospiraceae bacterium

          Lachnospiraceae

          GPTB0104

          NMDC20057824

          NMDCN0001CK7

          Lachnospiraceae bacterium

          Lachnospiraceae

          GPTB0118

          NMDC20057839

          NMDCN0001CKM

          Lachnospiraceae bacterium

          Lachnospiraceae

          GPTB0121

          NMDC20057842

          NMDCN0001CKP

          Lachnospiraceae bacterium

          Lachnospiraceae

          GPTB0140

          NMDC20057861

          NMDCN0001CLC


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